Cancer Type | Cohort Source | Cancer ID | Samples | Permission | Link | Data Download |
---|---|---|---|---|---|---|
Pheochromocytoma and Paraganglioma | TCGA | PCPG | 179 | Y | TCGA, GDAC | Download |
Prostate adenocarcinoma | TCGA | PRAD | 499 | Y | TCGA, GDAC | Download |
Sarcoma | TCGA | SARC | 261 | Y | TCGA, GDAC | Download |
Pancreatic adenocarcinoma | TCGA | PAAD | 185 | Y | TCGA, GDAC | Download |
Ovarian serous cystadenocarcinoma | TCGA | OV | 591 | Y | TCGA, GDAC, CPTAC | Download |
Lung squamous cell carcinoma | TCGA | LUSC | 504 | Y | TCGA, GDAC | Download |
Mesothelioma | TCGA | MESO | 87 | Y | TCGA, GDAC | Download |
Skin Cutaneous Melanoma | TCGA | SKCM | 470 | Y | TCGA, GDAC | Download |
Stomach adenocarcinoma | TCGA | STAD | 443 | Y | TCGA, GDAC | Download |
Adrenocortical carcinoma | TCGA | ACC | 92 | Y | TCGA, GDAC | Download |
Uterine Carcinosarcoma | TCGA | UCS | 57 | Y | TCGA, GDAC | Download |
Uveal Melanoma | TCGA | UVM | 80 | Y | TCGA, GDAC | Download |
Thymoma | TCGA | THYM | 124 | Y | TCGA, GDAC | Download |
Thyroid carcinoma | TCGA | THCA | 503 | Y | TCGA, GDAC | Download |
Stomach and Esophageal carcinoma | TCGA | STES | 628 | Y | TCGA, GDAC | Download |
Testicular Germ Cell Tumors | TCGA | TGCT | 134 | Y | TCGA, GDAC | Download |
Lung adenocarcinoma | TCGA | LUAD | 522 | Y | TCGA, GDAC | Download |
Uterine Corpus Endometrial Carcinoma | TCGA | UCEC | 548 | Y | TCGA, GDAC | Download |
Cholangiocarcinoma | TCGA | CHOL | 45 | Y | TCGA, GDAC | Download |
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma | TCGA | DLBC | 48 | Y | TCGA, GDAC | Download |
Esophageal carcinoma | TCGA | ESCA | 185 | Y | TCGA, GDAC | Download |
Cervical and endocervical cancers | TCGA | CESC | 307 | Y | TCGA, GDAC | Download |
Breast invasive carcinoma | TCGA | BRCA | 1097 | Y | TCGA, GDAC, CPTAC | Download |
Liver hepatocellular carcinoma | TCGA | LIHC | 377 | Y | TCGA, GDAC | Download |
Bladder urothelial carcinoma | TCGA | BLCA | 412 | Y | TCGA, GDAC | Download |
Glioblastoma multiforme | TCGA | GBM | 595 | Y | TCGA, GDAC | Download |
Colorectal adenocarcinoma | TCGA | COADREAD | 629 | Y | GDAC, CPTAC | Download |
Kidney renal papillary cell carcinoma | TCGA | KIRP | 291 | Y | TCGA, GDAC | Download |
Glioma | TCGA | GBMLGG | 1110 | Y | TCGA, GDAC | Download |
Brain Lower Grade Glioma | TCGA | LGG | 515 | Y | TCGA, GDAC | Download |
Kidney renal clear cell carcinoma | TCGA | KIRC | 537 | Y | TCGA, GDAC | Download |
Acute Myeloid Leukemia | TCGA | LAML | 200 | Y | TCGA, GDAC | Download |
Pan-kidney cohort | TCGA | KIPAN | 941 | Y | TCGA, GDAC | Download |
Head and Neck squamous cell carcinoma | TCGA | HNSC | 528 | Y | TCGA, GDAC | Download |
Kidney Chromophobe | TCGA | KICH | 113 | Y | TCGA, GDAC | Download |
CPTAC - Lung squamous cell carcinoma | CPTAC | LSCC | 108 | Y | Download | |
CPTAC - Glioblastoma | CPTAC | GBM | 99 | Y | CPTAC | Download |
CPTAC - Ovarian Cancer Confirmatory Study | CPTAC | OV | 83 | Y | CPTAC | Download |
CPTAC - Pancreatic Ductal Adenocarcinoma Discovery Study | CPTAC | PDAC | 140 | Y | CPTAC | Download |
CPTAC - Head-and-neck squamous cell carcinoma | CPTAC | HNSCC | 110 | Y | CPTAC | Download |
CPTAC-ICPC - Combined Lung Adenocarcinoma Cohorts | CPTAC | LUAD | 402 | N | - | - |
CPTAC - Lung Adenocarcinoma Confirmatory Study | CPTAC | LUAD | 123 | N | - | - |
CPTAC - Clear Cell Renal Cell Carcinoma Discovery Cohort | CPTAC | CCRCC | 110 | Y | CPTAC | Download |
CPTAC - Colon Adenocarcinoma | CPTAC | COAD | 210 | Y | CPTAC | Download |
CPTAC - Lung adenocarcinoma | CPTAC | LUAD | 110 | Y | CPTAC | Download |
CPTAC Gastric Cancer Discover Study | CPTAC | GC | 189 | N | - | - |
CPTAC - Uterine Corpus Endometrial Carcinoma | CPTAC | UCEC | 95 | Y | CPTAC | Download |
CPTAC - Uterine Corpus Endometrial Carcinoma Confirmatory Study | CPTAC | UCEC | 138 | Y | Publication | Download |
CPTAC - Breast cancer prospective cohort | CPTAC | BRCA | 122 | Y | CPTAC | Download |
CPTAC pancan - Head-and-neck squamous cell carcinoma | CPTAC-pancan | HNSCC | 108 | Y | CPTAC, PDC | Download |
CPTAC pancan - Glioblastoma | CPTAC-pancan | GBM | 98 | Y | CPTAC, PDC | Download |
CPTAC pancan - Lung squamous cell carcinoma | CPTAC-pancan | LSCC | 108 | Y | CPTAC, PDC | Download |
CPTAC pancan - Lung adenocarcinoma | CPTAC-pancan | LUAD | 110 | Y | CPTAC, PDC | Download |
CPTAC pancan - Colon Adenocarcinoma cohort | CPTAC-pancan | COAD | 109 | Y | CPTAC, PDC | Download |
CPTAC pancan - Breast cancer prospective cohort | CPTAC-pancan | BRCA | 122 | Y | CPTAC, PDC | Download |
CPTAC pancan - Pancreatic Ductal Adenocarcinoma | CPTAC-pancan | PDAC | 105 | Y | CPTAC, PDC | Download |
CPTAC pancan - Clear Cell Renal Cell Carcinoma | CPTAC-pancan | CCRCC | 103 | Y | CPTAC, PDC | Download |
CPTAC pancan - Uterine Corpus Endometrial Carcinoma | CPTAC-pancan | UCEC | 94 | Y | CPTAC, PDC | Download |
CPTAC pancan - Ovarian Cancer | CPTAC-pancan | OV | 83 | Y | CPTAC, PDC | Download |
Breast cancer ER+ PDX | PDX | BRCA | 22 | N | - | - |
PDX - Breast Cancer (TW) | PDX | BRCA | 16 | N | - | - |
PDX - Breast Cancer | PDX | BRCA | 37 | N | - | - |
PDX Breast Cancer (BCM_PDX_BRCA 2021) | PDX | BRCA | 94 | N | - | - |
CellLine Colorectal adenocarcinoma | CL | COADREAD | 44 | N | - | - |
Brain Metastatic Lung Cancer - Lung adenocarcinoma | BMLC | LUAD | 18 | N | - | - |
Liverpool - Non-Small Cell Lung Cancer | Liverpool | NSCLC | 194 | N | - | - |