| RNAseq (HiSeq, Gene level, Tumor) |
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RNAseq data, upper-quartile normalized (Illumina HiSeq platform, Gene-level) |
Gene |
Expression (log2(FPKM)) |
108 |
21792 |
cct |
| RNAseq (HiSeq, Gene level, Normal) |
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RNAseq data, upper-quartile normalized (Illumina HiSeq platform, Gene-level) |
Gene |
Expression (log2(FPKM)) |
94 |
21792 |
cct |
| Proteome (Gene level, TMT Log Ratio, Tumor) |
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Proteomics data log-ratio normalized (TMT data, Gene-level, Log Ratio) |
Gene |
Expression (TMT, Log2ratio) |
108 |
11111 |
cct |
| Proteome (Gene level, TMT Log Ratio, Normal) |
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Proteomics data log-ratio normalized (TMT data, Gene-level, Log Ratio) |
Gene |
Expression (TMT, Log2ratio) |
99 |
11111 |
cct |
| Phosphoproteome (Site level, Tumor) |
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Phosphoproteomics site level data |
Phosphosite |
Expression (TMT, Log2ratio) |
108 |
42908 |
cct |
| Phosphoproteome (Site level, Normal) |
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Phosphoproteomics site level data |
Phosphosite |
Expression (TMT, Log2ratio) |
99 |
42908 |
cct |
| Acetylproteome (Site level, Tumor) |
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Acetylproteomics site level data |
Acetylation site |
Expression (TMT, Log2ratio) |
108 |
7924 |
cct |
| Acetylproteome (Site level, Normal) |
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Acetylproteomics site level data |
Acetylation site |
Expression (TMT, Log2ratio) |
99 |
7924 |
cct |
| Ubiquitin (Site level, Tumor) |
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Ubiquitin site level data |
Ubiquitin site |
Expression (TMT, Log2ratio) |
85 |
14476 |
cct |
| Ubiquitin (Site level, Normal) |
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Ubiquitin site level data |
Ubiquitin site |
Expression (TMT, Log2ratio) |
58 |
14476 |
cct |
| Methylation (Gene level, Tumor) |
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Gene level methylation data |
gene |
Methylation (mean beta value) |
103 |
16478 |
cct |
| Methylation (Gene level, Normal) |
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Gene level methylation data |
gene |
Methylation (mean beta value) |
91 |
16478 |
cct |
| SCNV (Gene level, Tumor) |
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Gene level copy number data |
gene |
Copy Number Change (log ratios) |
108 |
27217 |
cct |
| MicroRNA (Gene level, Tumor) |
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miRNA expression RPM, log2 transformed |
miRgene |
Expression (log2 transformed RPM) |
107 |
427 |
cct |
| MicroRNA (Gene level, Normal) |
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miRNA expression RPM, log2 transformed |
miRgene |
Expression (log2 transformed RPM) |
94 |
446 |
cct |
| Circular RNA (Tumor) |
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Circular RNA expression RSEM, upper quantile normalized and log2 transformed |
circRNA |
Expression (log2 transformed RSEM) |
108 |
306 |
cct |
| Circular RNA (Normal) |
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Circular RNA expression RSEM, upper quantile normalized and log2 transformed |
circRNA |
Expression (log2 transformed RSEM) |
94 |
537 |
cct |
| Mutation (Gene level, Tumor) |
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Gene level somatic mutation |
gene |
Mutation Status |
108 |
12041 |
cbt |
| Clinical (Tumor) |
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Clinical annotation |
Clinical |
Phenotype |
108 |
7 |
tsi |
| Clinical (Normal) |
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Clinical annotation |
Clinical |
Phenotype |
99 |
6 |
tsi |
| Molecular phenotypes (Tumor) |
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Derived molecular phenotype |
Clinical |
Phenotype |
109 |
34 |
tsi |
| Molecular phenotypes (Normal) |
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Derived molecular phenotype |
Clinical |
Phenotype |
100 |
7 |
tsi |
