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Datasets for Pediatric_Brain_Tumor(CBTTC(The Children Brain Tumor Tissue Consortium))

OMICS Dataset Link Description Level Unit Samples Atrributes File type
pediatric brain tumor CBTTC cli Download Human Pediatric BT CBTTC Clinical Clinical Clinical Clinical Phenotype 223 10 tsi
pediatric brain tumor CBTTC phosProtein quantification zscore Download Human Pediatric BT CBTTC Phosphoproteome Gene Tumor TMT MS1 intensity zscores Gene Expression (Normalized Log2ratio zscores) 208 4483 cct
pediatric brain tumor CBTTC phosProtein quantification Download Human Pediatric BT CBTTC Phosphoproteome Gene Tumor TMT MS1 intensity Gene Expression (Normalized Log2ratio) 208 4483 cct
pediatric brain tumor CBTTC Protein quantification zscore Download Human Pediatric BT CBTTC Proteome Gene Tumor TMT MS1 intensity zscores Gene Expression (Normalized Log2ratio zscores) 208 6428 cct
pediatric brain tumor CBTTC Protein quantification Download Human Pediatric BT CBTTC Proteome Gene Tumor TMT MS1 intensity Gene Expression (Normalized Log2ratio) 208 6429 cct
pediatric brain tumor CBTTC RNAExpression RSEM FPKM Download Human Pediatric BT CBTTC RNA expression Gene Tumor expression levels from RNA-Seq (rsem FPKM) Gene Expression(FPKM) 219 56693 cct
pediatric brain tumor CBTTC RNAExpression RSEM log2(FPKM+1) Download Human Pediatric BT CBTTC RNA expression Gene Tumor expression levels from RNA-Seq (Z scores of log2(FPKM + 1) values) Gene Expression (Normalized Log2ratio) 219 56693 cct
pediatric brain tumor CBTTC SCNA all gene level Download Human Pediatric BT CBTTC SCNV Gene Predicted copy number values from WGS (Discrete) Gene Copy Number Change 209 34870 cct
pediatric brain tumor CBTTC somatic mutation gene level Download Human Pediatric BT CBTTC Mutation Gene strelka2, mutect2, lancet, and VarDict Java pipeline Gene Mutation Status (2 or more identified by strelka2, mutect2, lancet, and VarDict Java) 209 4819 cbt
pediatric brain tumor CBTTC somatic mutation site level Download Human Pediatric BT CBTTC Mutation Mutation Site strelka2, mutect2, lancet, and VarDict Java pipeline Mutation Site Mutation Status (2 or more identified by strelka2, mutect2, lancet, and VarDict Java) 209 8183 cbt